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Genomics of Disease

Inhoud

  • Experimentele omics technologieen (sequencing, microarrays, massaspectroscopie);
  • Toepassing van omics in biomedisch onderzoek;
  • Toepassing van omics in diagnostiek;
  • Analyse van biologische systemen (systeembiologie);
  • Analyse en interpretatie van omics data (bioinformatica);
  • Het managen van complexe en grote hoeveelheden data (informatiemanagement);
  • Het gebruik van moderne ICT in biomedisch onderzoek (e-Bioscience);

Onderwijsvorm

Hoorcolleges en computerpractica

Introduction Genomics of Disease

Public databases

Computer exercises from Bioinformatics Laboratory

Exome sequencing

Please the the instructions carefully and don't forget to email your answers to Antoine van Kampen
For these exercises you will need access to the Cloud. An IP number, login name and password will be provided to you

  • Exercises:
    • See syllabus

  • Documents
    • User manual of the Linux 'pico' editor
    • Excel file with all variants found in four patients with Nicolaides-Baraitser syndrome
    • R script with to implement your filtering strategy.

Public biological databases

e-Science

Systems Biology

Locaties

Contact

Coordinator
Prof. dr. Antoine van Kampen (a.h.vankampen@amc.uva.nl / 020-5667096 / 06-41768067)



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Topic revision: r26 - 16 Nov 2015, AntoineVanKampen
 

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