Reports

  • Willem Bouten, Antoine van Kampen, Arnold Smeulders (2009) e-Science research focus FNWI (pdf)
  • Antoine van Kampen (2008) e-Bioscience onderzoeksinfrastructuur in het AMC. Versterking van biomedisch en klinisch wetenschappelijk onderzoek. (pdf)
  • P.M.A. Sloot, D. Frenkel, H.A. Van der Vorst, A. van Kampen, H. Bal, P. Klint, R.M.M. Mattheij, J. van Wijk, J. Schaye, H-J Langevelde, R. H. Bisseling, , B. Smit, E. Valenteyn, H. Sips, J.B.T.M. Roerdink, K.G. Langedoen (2006) Computational e-Science. Studying complex systems in silico. A National Research Initiative (pdf)

In the press

  • Lots of press coverage for GoNL: the genome of the Netherlands (with contributions of Barbera van Schaik). Nature Genetics
  • Press release (NBIC, Just pick a card) on the paper of Miranda Stobbe that introduces consensus and conflict cards for metabolic pathway databases. BMC Systems Biology
  • Press releases by the AMC and the Max Planck Institute for Plant Breeding Research on the paper that describes how alpine rock cress uses a ribonucleic acid to measure its age and tell when it’s the right time to flower (with contributions of Emiel Ver Loren van Themaat and Perry Moerland). Science
  • Lots of press coverage for Recon 2: a community-driven global reconstruction of human metabolism (with contributions of Miranda Stobbe). Nature Biotechnology
  • Press release (NBIC, Disagreeing databases) on the paper of Miranda Stobbe that gives an improved description of the TCA cycle. FASEB J
  • Interview (NBIC, Many small improvements) with Antoine van Kampen on the exome study that identifiies missense mutations in SMARCA2 to cause Nicolaides-Baraitser syndrome. Nature Genetics
  • Barbera van Schaik about how she uses grid computing for dealing with large genomic datasets: http://www.youtube.com/watch?v=k9FXCpzzRB4 and http://www.youtube.com/watch?v=k9FXCpzzRB4
  • Press release (NBIC, Pathway databases differ considerably) on the paper of Miranda Stobbe that described a systematic comparison of five frequently used human metabolic pathway databases: BiGG, EHMN, HumanCyc, KEGG and Reactome. BMC Systems Biology
  • Interview (NBIC, Subtyping makes sense) with Perry Moerland about the recent work of Herman Sontrop on an evaluation protocol for subtype-specific breast cancer event prediction. PLoS ONE

AMC Magazine

  • Interview with Antoine van Kampen en Silvia Olabarriaga (Als een komeet door de rijstebrijberg) about e-science and GRID computing.
  • Interview with Mark Aarts (Wageningen University; Het geheime talent van de zinkboerenkers), Perry Moerland and Emiel Ver Loren van Themaat from the Bioinformatics Laboratory about the identification of genes involved in the uptake of heavy metals by Thlaspi caerulescens from a microarray study. [Pubmed]
  • Interview with Mark van Passel (AMC; Horizontaal vreemdgaan) about horizontal gene transfer and the approach developed by the Bioinformatics Laboratory (A.C. Luyf, A.H.C. van Kampen) to detect such events in prokaryotes. [Pubmed]

Personnel advertisement Volkskrant (May 19, 2007; Dutch)

Topic revision: r12 - 25 Feb 2016, PerryMoerland
 

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